caArray

caArray is an open source microarray data management system that allows users to submit, annotate and download microarray data. caArray was developed using the caBIG compatibility guidelines, as well as the Microarray Gene Expression Data

caELMIR

The intent of caELMIR is to provide the pre-clinical scientist with a data management system to record experimental data. caELMIR is a “LIMS” system for basic scientific data.

caIMAGE

caIMAGE is a cancer images database maintained by NCI. Investigators can register on the site, and then search for and submit images to the online image repository using a web browser

caMOD

The cancer models database (caMOD) provides information about animal models for human cancer to the public research community.

GenePattern

GenePattern puts sophisticated computational methods into the hands of the biomedical research community. A simple application interface gives a broad audience access to a growing repository of analytic tools for genomic data.

geWorkbench

geWorkbench provides an innovative, open-source software platform for genomic data integration, bringing together analysis and visualization tools for gene expression, sequences, pathways, and other biomedical data.

GOminer

GoMiner™ is a tool for biological interpretation of 'omic' data – including data from gene expression microarrays. Omic experiments often generate lists of dozens or hundreds of genes that differ in expression between samples

NCIA

The National Cancer Imaging Archive (NCIA) is a searchable, national repository integrating in vivo cancer images with clinical and genomic data.

PathwayTools

Pathways is a suite of tools, which include: cPath, an open source pathway database and software suite designed for systems biology research; and Cytoscape, used to overlay gene expression data and visualize the results.

UniProt

UniProt (Universal Protein Resource) is the world's most comprehensive catalog of information on proteins. It is a central repository of protein sequence and function created by joining the information contained in Swiss-Prot, TrEMBL, and PIR.